Vasyl Pihur

Summary

Affiliation: University of Louisville
Country: USA

Publications

  1. pmc RankAggreg, an R package for weighted rank aggregation
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    BMC Bioinformatics 10:62. 2009
  2. pmc An adaptive optimal ensemble classifier via bagging and rank aggregation with applications to high dimensional data
    Susmita Datta
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    BMC Bioinformatics 11:427. 2010
  3. pmc MmPalateMiRNA, an R package compendium illustrating analysis of miRNA microarray data
    Guy N Brock
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    Source Code Biol Med 8:1. 2013
  4. ncbi request reprint Weighted rank aggregation of cluster validation measures: a Monte Carlo cross-entropy approach
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY 40202, USA
    Bioinformatics 23:1607-15. 2007
  5. doi request reprint Reconstruction of genetic association networks from microarray data: a partial least squares approach
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY 40292, USA
    Bioinformatics 24:561-8. 2008
  6. pmc TGFβ-1 and Wnt-3a interact to induce unique gene expression profiles in murine embryonic palate mesenchymal cells
    Dennis R Warner
    University of Louisville Birth Defects Center, Department of Molecular, Cellular and Craniofacial Biology, University of Louisville, ULSD, Louisville, KY 40292, USA
    Reprod Toxicol 31:128-33. 2011
  7. doi request reprint Feature selection and machine learning with mass spectrometry data
    Susmita Datta
    Department of Bioinformatics and Biostatistics, School of Public Health and Information Sciences, University of Louisville, Louisville, KY, USA
    Methods Mol Biol 593:205-29. 2010
  8. pmc Developmental microRNA expression profiling of murine embryonic orofacial tissue
    Partha Mukhopadhyay
    University of Louisville Birth Defects Center, Department of Molecular Cellular and Craniofacial Biology, ULSD, University of Louisville, Kentucky, USA
    Birth Defects Res A Clin Mol Teratol 88:511-34. 2010

Detail Information

Publications8

  1. pmc RankAggreg, an R package for weighted rank aggregation
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    BMC Bioinformatics 10:62. 2009
    ..One of the major strengths of rank-based aggregation is the ability to combine lists coming from different sources and platforms, for example different microarray chips, which may or may not be directly comparable otherwise...
  2. pmc An adaptive optimal ensemble classifier via bagging and rank aggregation with applications to high dimensional data
    Susmita Datta
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    BMC Bioinformatics 11:427. 2010
    ....
  3. pmc MmPalateMiRNA, an R package compendium illustrating analysis of miRNA microarray data
    Guy N Brock
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA
    Source Code Biol Med 8:1. 2013
    ..As with mRNA expression profiling arrays, miRNA microarrays come in a variety of platforms from numerous manufacturers, and there are a multitude of techniques available for reducing and analyzing these data...
  4. ncbi request reprint Weighted rank aggregation of cluster validation measures: a Monte Carlo cross-entropy approach
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY 40202, USA
    Bioinformatics 23:1607-15. 2007
    ..An automated and objective way of reconciling the rankings is needed...
  5. doi request reprint Reconstruction of genetic association networks from microarray data: a partial least squares approach
    Vasyl Pihur
    Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY 40292, USA
    Bioinformatics 24:561-8. 2008
    ..Here, we introduce a novel computational method based on the partial least squares (PLS) regression technique for reconstruction of genetic networks from microarray data...
  6. pmc TGFβ-1 and Wnt-3a interact to induce unique gene expression profiles in murine embryonic palate mesenchymal cells
    Dennis R Warner
    University of Louisville Birth Defects Center, Department of Molecular, Cellular and Craniofacial Biology, University of Louisville, ULSD, Louisville, KY 40292, USA
    Reprod Toxicol 31:128-33. 2011
    ..In the current study we tested the hypothesis that unique gene expression profiles are induced in murine embryonic palate mesenchymal cells as a result of this cross-talk between the TGFβ and Wnt signal transduction pathways...
  7. doi request reprint Feature selection and machine learning with mass spectrometry data
    Susmita Datta
    Department of Bioinformatics and Biostatistics, School of Public Health and Information Sciences, University of Louisville, Louisville, KY, USA
    Methods Mol Biol 593:205-29. 2010
    ..In this chapter, we provide a review of major contributions toward feature selection and classification of proteomic mass spectra involving MALDI-TOF and SELDI-TOF technology...
  8. pmc Developmental microRNA expression profiling of murine embryonic orofacial tissue
    Partha Mukhopadhyay
    University of Louisville Birth Defects Center, Department of Molecular Cellular and Craniofacial Biology, ULSD, University of Louisville, Kentucky, USA
    Birth Defects Res A Clin Mol Teratol 88:511-34. 2010
    ..MicroRNA gene expression profiling is an effective means of acquiring novel and valuable information regarding the expression and regulation of genes, under the control of miRNA, involved in mammalian orofacial development...